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1

Human behaviour and cognition of spatial experience; a model for enhancing the quality of spatial experiences in the built environment

Baradaran Rahimi, Farzan, Levy, Richard M., Boyd, Jeffrey E., Dadkhahfard, Shima

Journal:

International Journal of Industrial Ergonomics

Year:

2018

Language:

english

File:

PDF, 3.32 MB

english, 2018

2

HIF1A Overexpression Is Associated with Poor Prognosis in a Cohort of 731 Colorectal Cancers

Yoshifumi Baba, Katsuhiko Nosho, Kaori Shima, Natsumi Irahara, Andrew T. Chan, Jeffrey A. Meyerhardt, Daniel C. Chung, Edward L. Giovannucci, Charles S. Fuchs, Shuji Ogino

Journal:

The American Journal of Pathology

Year:

2010

Language:

english

File:

PDF, 605 KB

english, 2010

3

Near-infrared spectroscopy muscle oximetry of patients with postural orthostatic tachycardia syndrome

Kadamati, Parvathi, Sugar, Jeffrey J., Quirk, Brendan J., Mehrvar, Shima, Chelimsky, Gisela G., Whelan, Harry T., Chelimsky, Thomas C., Ranji, Mahsa

Journal:

Journal of Innovative Optical Health Sciences

Year:

2018

Language:

english

File:

PDF, 454 KB

english, 2018

4

Phosphorylated AKT expression is associated with PIK3CA mutation, low stage, and favorable outcome in 717 colorectal cancers

Yoshifumi Baba, Katsuhiko Nosho, Kaori Shima, Marika Hayashi, Jeffrey A. Meyerhardt, Andrew T. Chan, Edward Giovannucci, Charles S. Fuchs, Shuji Ogino

Journal:

Year:

2011

Language:

english

File:

PDF, 357 KB

english, 2011

5

Prognostic significance of CDKN2A (p16) promoter methylation and loss of expression in 902 colorectal cancers: Cohort study and literature review

Kaori Shima, Katsuhiko Nosho, Yoshifumi Baba, Mami Cantor, Jeffrey A. Meyerhardt, Edward L. Giovannucci, Charles S. Fuchs, Shuji Ogino

Journal:

International Journal of Cancer

Year:

2011

Language:

english

File:

PDF, 405 KB

english, 2011

6

Association of increased basement membrane invasiveness with absence of estrogen receptor and expression of vimentin in human breast cancer cell lines

Erik W. Thompson, Soonmyoung Paik, Nils Brünner, Connie L. Sommers, Gerhard Zugmaier, Robert Clarke, Thomas B. Shima, Jeffrey Torri, Steven Donahue, Marc E. Lippman, George R. Martin, Robert B. Dickso

Journal:

Journal of Cellular Physiology

Year:

1992

Language:

english

File:

PDF, 1.29 MB

english, 1992

7

Tumour-infiltrating T-cell subsets, molecular changes in colorectal cancer, and prognosis: cohort study and literature review

Katsuhiko Nosho, Yoshifumi Baba, Noriko Tanaka, Kaori Shima, Marika Hayashi, Jeffrey A Meyerhardt, Edward Giovannucci, Glenn Dranoff, Charles S Fuchs, Shuji Ogino

Journal:

The Journal of Pathology

Year:

2010

Language:

english

File:

PDF, 407 KB

english, 2010

8

Larval sensory abilities and mechanisms of habitat selection of a coral reef fish during settlement

David Lecchini, Jeffrey Shima, Bernard Banaigs, René Galzin

Journal:

Year:

2005

Language:

english

File:

PDF, 370 KB

english, 2005

9

Regulation of local populations of a coral reef fish via joint effects of density- and number-dependent mortality

Jeffrey S. Shima

Journal:

Year:

2001

Language:

english

File:

PDF, 77 KB

english, 2001

10

Effects of microhabitat availability on estimates of density of a reef fish: implications for assessments of marine protected areas

Sonja L. Miller, Jeffrey S. Shima, Nicole E. Phillips

Journal:

Year:

2012

Language:

english

File:

PDF, 1007 KB

english, 2012

11

The legacy of dispersal: larval experience shapes persistence later in the life of a reef fish

Jeffrey S. Shima, Stephen E. Swearer

Journal:

Journal of Animal Ecology

Year:

2010

Language:

english

File:

PDF, 248 KB

english, 2010

12

Variation in the effects of larval history on juvenile performance of a temperate reef fish

ANNA C. SMITH, JEFFREY S. SHIMA

Journal:

Austral Ecology

Year:

2011

Language:

english

File:

PDF, 344 KB

english, 2011

13

Disentangling the effects of macroalgae on the abundance of temperate reef fishes

Alejandro Pérez-Matus, Jeffrey S. Shima

Journal:

Journal of Experimental Marine Biology and Ecology

Year:

2010

Language:

english

File:

PDF, 1.48 MB

english, 2010

14

Ontogenetic variation in site fidelity and homing behaviour of a temperate reef fish

Jeffrey S. Shima, Daniel McNaughtan, Shane W. Geange, Shaun Wilkinson

Journal:

Journal of Experimental Marine Biology and Ecology

Year:

2012

Language:

english

File:

PDF, 360 KB

english, 2012

15

Mortality of necrotizing enterocolitis expressed by birth weight categories

Shimae Cross Fitzgibbons, Yiming Ching, David Yu, Joe Carpenter, Michael Kenny, Christopher Weldon, Craig Lillehei, Clarissa Valim, Jeffrey D. Horbar, Tom Jaksic

Journal:

Journal of Pediatric Surgery

Year:

2009

Language:

english

File:

PDF, 105 KB

english, 2009

16

Consistent deleterious effects of vermetid gastropods on coral performance

Shima, Jeffrey S., Phillips, Nicole E., Osenberg, Craig W.

Journal:

Journal of Experimental Marine Biology and Ecology

Year:

2013

Language:

english

File:

PDF, 665 KB

english, 2013

17

A unified analysis of niche overlap incorporating data of different types

Shane W. Geange, Shirley Pledger, Kevin C. Burns, Jeffrey S. Shima

Journal:

Methods in Ecology and Evolution

Year:

2011

Language:

english

File:

PDF, 238 KB

english, 2011

18

A Prospective Cohort Study Shows Unique Epigenetic, Genetic, and Prognostic Features of Synchronous Colorectal Cancers

Katsuhiko Nosho, Shoko Kure, Natsumi Irahara, Kaori Shima, Yoshifumi Baba, Donna Spiegelman, Jeffrey A. Meyerhardt, Edward L. Giovannucci, Charles S. Fuchs, Shuji Ogino

Journal:

Gastroenterology

Year:

2009

Language:

english

File:

PDF, 1.00 MB

english, 2009

19

Negative Lymph Node Count Is Associated With Survival of Colorectal Cancer Patients, Independent of Tumoral Molecular Alterations and Lymphocytic Reaction

Ogino, Shuji, Nosho, Katsuhiko, Irahara, Natsumi, Shima, Kaori, Baba, Yoshifumi, Kirkner, Gregory J, Mino-Kenudson, Mari, Giovannucci, Edward L, Meyerhardt, Jeffrey A, Fuchs, Charles S

Journal:

American Journal of Gastroenterology

Year:

2010

Language:

english

File:

PDF, 346 KB

english, 2010

20

CRYPTIC DENSITY DEPENDENCE: EFFECTS OF COVARIATION BETWEEN DENSITY AND SITE QUALITY IN REEF FISH

Shima, Jeffrey S., Osenberg, Craig W.

Journal:

Year:

2003

Language:

english

File:

PDF, 414 KB

english, 2003

21

RECRUITMENT OF A CORAL REEF FISH: ROLES OF SETTLEMENT, HABITAT, AND POSTSETTLEMENT LOSSES

Shima, Jeffrey S.

Journal:

Year:

2001

Language:

english

File:

PDF, 193 KB

english, 2001

22

Habitat configuration and availability influences the settlement of temperate reef fishes (Tripterygiidae)

Morton, Dana N., Shima, Jeffrey S.

Journal:

Journal of Experimental Marine Biology and Ecology

Year:

2013

Language:

english

File:

PDF, 506 KB

english, 2013

23

Patterns of co-occurrence and interactions between age classes of the common triplefin,Forsterygion lapillum

Mensink, Paul J., Shima, Jeffrey S.

Journal:

Year:

2014

Language:

english

File:

PDF, 646 KB

english, 2014

24

Photochemical and Thermal Stability of Green and Blue Proteorhodopsins: Implications for Protein-Based Bioelectronic Devices

Ranaghan, Matthew J., Shima, Sumie, Ramos, Lavosier, Poulin, Daniel S., Whited, Gregg, Rajasekaran, Sanguthevar, Stuart, Jeffrey A., Albert, Arlene D., Birge, Robert R.

Journal:

Journal of Physical Chemistry B

Year:

2010

Language:

english

File:

PDF, 2.15 MB

english, 2010

25

Larval quality is shaped by matrix effects: implications for connectivity in a marine metapopulation

Shima, Jeffrey S., Swearer, Stephen E.

Journal:

Year:

2009

Language:

english

File:

PDF, 530 KB

english, 2009

26

Reproductive success of parasitized males in a marine reef fish

Mensink, Paul J., Geange, Shane W., Shima, Jeffrey S.

Journal:

Year:

2014

Language:

english

File:

PDF, 602 KB

english, 2014

27

Geographic and sex‐specific variation in growth of yellow‐eyed mullet, Aldrichetta forsteri, from estuaries around New Zealand

Curtis, Thomas D., Shima, Jeffrey S.

Journal:

New Zealand Journal of Marine and Freshwater Research

Year:

2005

Language:

english

File:

PDF, 3.73 MB

english, 2005

28

Demographic heterogeneity and the dynamics of open populations

Noonburg, Erik G., Chen, Adam, Shima, Jeffrey S., Swearer, Stephen E.

Journal:

Year:

2015

Language:

english

File:

PDF, 2.10 MB

english, 2015

29

QUANTIFYING SITE QUALITY IN A HETEROGENEOUS LANDSCAPE: RECRUITMENT OF A REEF FISH

Shima, Jeffrey S., Osenberg, Craig W., St. Mary, Colette M.

Journal:

Year:

2008

Language:

english

File:

PDF, 519 KB

english, 2008

30

Inferring dispersal and migrations from incomplete geochemical baselines: analysis of population structure using Bayesian infinite mixture models

Neubauer, Philipp, Shima, Jeffrey S., Swearer, Stephen E., Borger, Luca

Journal:

Methods in Ecology and Evolution

Year:

2013

Language:

english

File:

PDF, 469 KB

english, 2013

31

Life history and matrix heterogeneity interact to shape metapopulation connectivity in spatially structured environments

Shima, Jeffrey S., Noonburg, Erik G., Phillips, Nicole E.

Journal:

Year:

2010

Language:

english

File:

PDF, 689 KB

english, 2010

32

Algal and invertebrate bioindicators detect sewage effluent along the coast of Titahi Bay, Wellington, New Zealand

Dudley, Bruce D, Shima, Jeffrey S

Journal:

New Zealand Journal of Marine and Freshwater Research

Year:

2010

Language:

english

File:

PDF, 338 KB

english, 2010

33

A Framework for Assessing Impacts of Marine Protected Areas in Moorea (French Polynesia) 1

de Loma, Thierry Lison, Osenberg, Craig W., Shima, Jeffrey S., Chancerelle, Yannick, Davies, Neil, Brooks, Andrew J., Galzin, René

Journal:

Pacific Science

Year:

2008

Language:

english

File:

PDF, 1.88 MB

english, 2008

34

Larval Quality Is Shaped by Matrix Effects: Implications for Connectivity in a Marine Metapopulation

Jeffrey S. Shima and Stephen E. Swearer

Journal:

Year:

2009

Language:

english

File:

PDF, 2.36 MB

english, 2009

35

Rotation and alignment of rods in two-dimensional chaotic flow

Parsa, Shima, Guasto, Jeffrey S., Kishore, Monica, Ouellette, Nicholas T., Gollub, J. P., Voth, Greg A.

Journal:

Physics of Fluids

Year:

2011

Language:

english

File:

PDF, 1.05 MB

english, 2011

36

Vermetid gastropods mediate within-colony variation in coral growth to reduce rugosity

Shima, Jeffrey S., McNaughtan, Daniel, Strong, Amanda T.

Journal:

Year:

2015

Language:

english

File:

PDF, 665 KB

english, 2015

37

Evidence and population consequences of shared larval dispersal histories in a marine fish

Shima, Jeffrey S., Swearer, Stephen E.

Journal:

Year:

2015

Language:

english

File:

PDF, 2.16 MB

english, 2015

38

Anterior cervical discectomy and interbody fusion

Shima, Toshio, Keller, Jeffrey T., Alvira, Mariano M., Mayfield, Frank H., Dunsker, Stewart B.

Journal:

Journal of Neurosurgery

Year:

1979

Language:

english

File:

PDF, 2.41 MB

english, 1979

39

[13C]Methionine Breath Test to Assess Intestinal Failure-Associated Liver Disease

Duro, Debora, Fitzgibbons, Shimae, Valim, Clarissa, Yang, Chi-Fu Jeffrey, Zurakowski, David, Dolan, Melanie, Bechard, Lori, Yu, Yong Ming, Duggan, Christopher, Jaksic, Tom

Journal:

Pediatric Research

Year:

2010

Language:

english

File:

PDF, 312 KB

english, 2010

40

Cryptic Density Dependence: Effects of Covariation between Density and Site Quality in Reef Fish

Jeffrey S. Shima and Craig W. Osenberg

Journal:

Year:

2003

Language:

english

File:

PDF, 415 KB

english, 2003

41

Variation in the growth and survival of the tropical vermetid gastropodCeraesignum maximumis driven by size, habitat, and density

Shima, Jeffrey S., Phillips, Nicole E., Osenberg, Craig W.

Journal:

Year:

2016

Language:

english

File:

PDF, 949 KB

english, 2016

42

SPIE Proceedings [SPIE AeroSense '99 - Orlando, FL (Monday 5 April 1999)] Infrared Imaging Systems: Design, Analysis, Modeling, and Testing X - Imaging artifacts due to pixel spatial sampling smear and amplitude quantization in two-dimensional visible imaging arrays

Lomheim, Terrence S., Kwok, Jeffrey D., Dutton, Tracy E., Shima, Ralph M., Johnson, Jerris F., Boucher, Richard H., Wrigley, Christopher J., Holst, Gerald C.

Year:

1999

Language:

english

File:

PDF, 5.54 MB

english, 1999

43

Recruitment of a Coral Reef Fish: Roles of Settlement, Habitat, and Postsettlement Losses

Jeffrey S. Shima

Journal:

Year:

2001

Language:

english

File:

PDF, 1.99 MB

english, 2001

44

Interactive effects of shelter and conspecific density shape mortality, growth, and condition in juvenile reef fish

Ford, John R., Shima, Jeffrey S., Swearer, Stephen E.

Journal:

Year:

2016

Language:

english

File:

PDF, 345 KB

english, 2016

45

Quantifying Site Quality in a Heterogeneous Landscape: Recruitment of a Reef Fish

Jeffrey S. Shima, Craig W. Osenberg and Colette M. St. Mary

Journal:

Year:

2008

Language:

english

File:

PDF, 1.42 MB

english, 2008

46

Larval Sensory Abilities and Mechanisms of Habitat Selection of a Coral Reef Fish during Settlement

David Lecchini, Jeffrey Shima, Bernard Banaigs and René Galzin

Journal:

Year:

2005

Language:

english

File:

PDF, 1.45 MB

english, 2005

47

Life history and matrix heterogeneity interact to shape metapopulation connectivity in spatially structured environments

Jeffrey S. Shima, Erik G. Noonburg and Nicole E. Phillips

Journal:

Year:

2010

Language:

english

File:

PDF, 2.04 MB

english, 2010

48

Regulation of Local Populations of a Coral Reef Fish via Joint Effects of Density- and Number-Dependent Mortality

Jeffrey S. Shima

Journal:

Year:

2001

Language:

english

File:

PDF, 1.29 MB

english, 2001

49

Striosome–dendron bouquets highlight a unique striatonigral circuit targeting dopamine-containing neurons

Crittenden, Jill R., Tillberg, Paul W., Riad, Michael H., Shima, Yasuyuki, Gerfen, Charles R., Curry, Jeffrey, Housman, David E., Nelson, Sacha B., Boyden, Edward S., Graybiel, Ann M.

Journal:

Proceedings of the National Academy of Sciences

Year:

2016

Language:

english

File:

PDF, 2.68 MB

english, 2016

50

Home-range size in juveniles of the temperate reef fish, the common triplefin (Forsterygion lapillum)

Mensink, Paul J., Shima, Jeffrey S.

Journal:

Marine and Freshwater Research

Year:

2016

Language:

english

File:

PDF, 276 KB

english, 2016